Regenerative Medicine News and General Information
New Cancer Therapies from Liquid Droplet Involved in Stem Cell Differentiation
Oct
Stem cells overflow with potential. Their ability to become other cell types is crucial to our bodies, both during development and throughout life. But this potential can be our very downfall if it goes wrong, turning some of our most useful cells into malignant cancers.
While investigating a pathway involved in stem cell differentiation, researchers at UC Santa Barbara found that rather than forming an assembly line or rigid structure, all the proteins involved coalesce into a liquid droplet. Through modeling and manipulation, the team began to reveal how cells use this droplet to process and relay information, and how it might malfunction in cancers.
The same processes that organize dew drops on a spiderweb are happening in the cells to make this liquid, molecular computer appear or disappear on command,” said senior author Max Wilson, an assistant professor in the Department of Molecular, Cellular, and Developmental Biology. “And when it goes wrong, it causes basically 100% of colorectal cancers and is implicated in a large number of other cancers.”
An important process
A host of mechanisms guide a stem cell to differentiate into a specialized cell type. Among the most important is the Wnt pathway (wingless-related integration sit, which takes input from outside the cell, processes it and relays instructions to the nucleus. This starts a chain of actions that tells the stem cell it’s time to differentiate, as well as what type of cell to become. The Wnt pathway is involved in determining the fate of every stem cell, and it appears unchanged across virtually all animals.
Given its importance, Wilson and his colleagues wanted to learn how the Wnt pathway was physically organized inside the cell. They focused on two proteins, Axin and APC ,that seem to provide the scaffolding for the entire process, orchestrating the intricate dance of other proteins.
Function follows form
Understanding a protein requires understanding its structure, as the molecule’s intricate geometry often matters as much as its composition. So the team fed the proteins’ chemical makeup to a program called AlphaFold, a deep-learning software that Google developed to predict the structures that proteins take.
The program returned “a random pile of spaghetti,” which is as close as the AI gets to a shrug and an error message, Wilson said.
This suggested that Axin and APC may be working in a very unconventional fashion. Rather than operating like a rigid lock and key, the proteins could be functioning in a much more fluid, dynamic manner. “We thought they might be forming intracellular liquids, like oil droplets in salad dressing,” Wilson said. The only way to tell was to look.
So they used CRISPR/Cas9 to add a fluorescent tag to all the major proteins they knew were part of the Wnt pathway. Then they watched through the microscope as the proteins coalesced into a liquid droplet within the cell’s cytoplasm.
A peculiar pathway
It’s in this liquid droplet that most of the Wnt pathway occurs, which eventually sends a message to the nucleus telling the cell to differentiate. It also triggers changes to gene expression that dictate what the stem cell becomes. “It’s like a tiny little liquid computer, right in the middle of the cell,” Wilson mused. Despite its importance, this was the first time scientists had observed the Wnt pathway in action.
The cancer connection
The Wnt pathway has a strong link to colorectal cancer. Intestinal epithelial cells live for only about three days before sloughing off. They’re replenished by stem cells that reside in protected indentations in the intestinal lining. When a replacement is needed, the stem cell divides, and one daughter becomes an intestinal cell as it migrates upward.
A mutation in the genes involved in the Wnt pathway can cause a cell to become cancerous ,growing and multiplying with no regard to its neighbors or environmental conditions.
Clearly, altering the gene somehow changes the dynamics and structure of the Wnt blob. And while both Axin and APC comprise the droplet, the pathway appears much more sensitive to issues with the APC gene. This is another facet of the system the team is currently researching.
There’s a large unmet need for colorectal cancer treatments. In fact, there are no drugs approved by the FDA that target the Wnt pathway. “That fact, in and of itself, suggests we might have been thinking about this incorrectly,” Wilson said. “And this new idea of a liquid orchestrating the whole process might help us design new drugs and therapies.”
The researchers are looking at how cancer mutations affect droplet dynamics and mapping all of the proteins involved in the Wnt pathway. A proper catalog should provide a list of possible targets for new therapies.
SOURCE:
Ryan S. Lach, Chongxu Qiu, Erfan Zeyaei Kajbaf, Naomi Baxter, Dasol Han, Alex Wang, Hannah Lock, Orlando Chirikian, Beth Pruitt, Maxwell Z. Wilson, (September 19, 2022). Nucleation of the destruction complex on the centrosome accelerates degradation of β-catenin and regulates Wnt signal transmission. Proceedings of the National Academy of Sciences. Retrieved from : https://www.sciencedaily.com/releases/2022/09/220929133318.htm
https://www.sciencedaily.com/releases/2022/09/220929133318.htm
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